WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 4451823 total bases: 641062512 Q20 bases: 628314620(98.0114%) Q30 bases: 608327087(94.8936%) Read1 after filtering: total reads: 4447439 total bases: 640426499 Q20 bases: 627856162(98.0372%) Q30 bases: 607937835(94.927%) Filtering result: reads passed filter: 4447439 reads failed due to low quality: 858 reads failed due to too many N: 3526 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 82.9204% JSON report: SekiuWA_FG005.json HTML report: SekiuWA_FG005.html fastp -i SekiuWA_FG005.F.fq.gz -o SekiuWA_FG005.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_FG005.json -h SekiuWA_FG005.html fastp v0.20.0, time used: 47 seconds