WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 4158658 total bases: 598846752 Q20 bases: 587186206(98.0528%) Q30 bases: 568848207(94.9906%) Read1 after filtering: total reads: 4154384 total bases: 598227943 Q20 bases: 586750498(98.0814%) Q30 bases: 568482051(95.0277%) Filtering result: reads passed filter: 4154384 reads failed due to low quality: 1007 reads failed due to too many N: 3267 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 85.2458% JSON report: SekiuWA_FG004.json HTML report: SekiuWA_FG004.html fastp -i SekiuWA_FG004.F.fq.gz -o SekiuWA_FG004.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_FG004.json -h SekiuWA_FG004.html fastp v0.20.0, time used: 42 seconds