WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 5014592 total bases: 722101248 Q20 bases: 708007461(98.0482%) Q30 bases: 685934670(94.9915%) Read1 after filtering: total reads: 5009789 total bases: 721405970 Q20 bases: 707503050(98.0728%) Q30 bases: 685502631(95.0231%) Filtering result: reads passed filter: 5009789 reads failed due to low quality: 836 reads failed due to too many N: 3967 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 80.4292% JSON report: SekiuWA_FG002.json HTML report: SekiuWA_FG002.html fastp -i SekiuWA_FG002.F.fq.gz -o SekiuWA_FG002.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_FG002.json -h SekiuWA_FG002.html fastp v0.20.0, time used: 50 seconds