WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 4503032 total bases: 648436608 Q20 bases: 635290332(97.9726%) Q30 bases: 614730883(94.802%) Read1 after filtering: total reads: 4498451 total bases: 647771560 Q20 bases: 634815401(97.9999%) Q30 bases: 614329173(94.8373%) Filtering result: reads passed filter: 4498451 reads failed due to low quality: 939 reads failed due to too many N: 3642 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 79.4157% JSON report: SekiuWA_FG001.json HTML report: SekiuWA_FG001.html fastp -i SekiuWA_FG001.F.fq.gz -o SekiuWA_FG001.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_FG001.json -h SekiuWA_FG001.html fastp v0.20.0, time used: 46 seconds