WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 2110098 total bases: 303854112 Q20 bases: 295070381(97.1092%) Q30 bases: 277901277(91.4588%) Read1 after filtering: total reads: 2109182 total bases: 303616808 Q20 bases: 294958873(97.1484%) Q30 bases: 277826701(91.5057%) Filtering result: reads passed filter: 2109182 reads failed due to low quality: 377 reads failed due to too many N: 539 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 89.2929% JSON report: SekiuWA_66.json HTML report: SekiuWA_66.html fastp -i SekiuWA_66.F.fq.gz -o SekiuWA_66.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_66.json -h SekiuWA_66.html fastp v0.20.0, time used: 27 seconds