WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 1682542 total bases: 242286048 Q20 bases: 234887407(96.9463%) Q30 bases: 220976177(91.2047%) Read1 after filtering: total reads: 1681800 total bases: 242079572 Q20 bases: 234794935(96.9908%) Q30 bases: 220916550(91.2578%) Filtering result: reads passed filter: 1681800 reads failed due to low quality: 316 reads failed due to too many N: 426 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 89.7016% JSON report: SekiuWA_63.json HTML report: SekiuWA_63.html fastp -i SekiuWA_63.F.fq.gz -o SekiuWA_63.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_63.json -h SekiuWA_63.html fastp v0.20.0, time used: 24 seconds