WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 2446462 total bases: 352290528 Q20 bases: 342085075(97.1031%) Q30 bases: 322020572(91.4077%) Read1 after filtering: total reads: 2445249 total bases: 351995880 Q20 bases: 341943214(97.1441%) Q30 bases: 321924403(91.4569%) Filtering result: reads passed filter: 2445249 reads failed due to low quality: 521 reads failed due to too many N: 692 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 87.1046% JSON report: SekiuWA_59.json HTML report: SekiuWA_59.html fastp -i SekiuWA_59.F.fq.gz -o SekiuWA_59.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_59.json -h SekiuWA_59.html fastp v0.20.0, time used: 32 seconds