WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 2880359 total bases: 414771696 Q20 bases: 402723520(97.0952%) Q30 bases: 378974604(91.3694%) Read1 after filtering: total reads: 2879054 total bases: 414452613 Q20 bases: 402567225(97.1323%) Q30 bases: 378866706(91.4138%) Filtering result: reads passed filter: 2879054 reads failed due to low quality: 526 reads failed due to too many N: 779 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 86.3766% JSON report: SekiuWA_57.json HTML report: SekiuWA_57.html fastp -i SekiuWA_57.F.fq.gz -o SekiuWA_57.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_57.json -h SekiuWA_57.html fastp v0.20.0, time used: 35 seconds