WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 2118246 total bases: 305027424 Q20 bases: 295877348(97.0002%) Q30 bases: 278363468(91.2585%) Read1 after filtering: total reads: 2117176 total bases: 304615905 Q20 bases: 295722608(97.0805%) Q30 bases: 278279375(91.3542%) Filtering result: reads passed filter: 2117176 reads failed due to low quality: 474 reads failed due to too many N: 596 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 86.8807% JSON report: SekiuWA_53.json HTML report: SekiuWA_53.html fastp -i SekiuWA_53.F.fq.gz -o SekiuWA_53.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_53.json -h SekiuWA_53.html fastp v0.20.0, time used: 29 seconds