WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 3204245 total bases: 461411280 Q20 bases: 447768552(97.0433%) Q30 bases: 421305878(91.3081%) Read1 after filtering: total reads: 3202528 total bases: 460783288 Q20 bases: 447528545(97.1234%) Q30 bases: 421172738(91.4036%) Filtering result: reads passed filter: 3202528 reads failed due to low quality: 798 reads failed due to too many N: 919 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 88.8403% JSON report: SekiuWA_52.json HTML report: SekiuWA_52.html fastp -i SekiuWA_52.F.fq.gz -o SekiuWA_52.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_52.json -h SekiuWA_52.html fastp v0.20.0, time used: 39 seconds