WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 2554384 total bases: 367831296 Q20 bases: 356769211(96.9926%) Q30 bases: 335759718(91.2809%) Read1 after filtering: total reads: 2553077 total bases: 367443818 Q20 bases: 356604284(97.05%) Q30 bases: 335658504(91.3496%) Filtering result: reads passed filter: 2553077 reads failed due to low quality: 601 reads failed due to too many N: 706 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 88.1998% JSON report: SekiuWA_50.json HTML report: SekiuWA_50.html fastp -i SekiuWA_50.F.fq.gz -o SekiuWA_50.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_50.json -h SekiuWA_50.html fastp v0.20.0, time used: 34 seconds