WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 4131902 total bases: 594993888 Q20 bases: 577926111(97.1314%) Q30 bases: 544205005(91.464%) Read1 after filtering: total reads: 4129929 total bases: 594241896 Q20 bases: 577637275(97.2057%) Q30 bases: 544042315(91.5523%) Filtering result: reads passed filter: 4129929 reads failed due to low quality: 786 reads failed due to too many N: 1187 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 83.459% JSON report: SekiuWA_44.json HTML report: SekiuWA_44.html fastp -i SekiuWA_44.F.fq.gz -o SekiuWA_44.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_44.json -h SekiuWA_44.html fastp v0.20.0, time used: 47 seconds