WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 2376402 total bases: 342201888 Q20 bases: 332123707(97.0549%) Q30 bases: 312299024(91.2616%) Read1 after filtering: total reads: 2375220 total bases: 341920678 Q20 bases: 331985572(97.0943%) Q30 bases: 312203795(91.3088%) Filtering result: reads passed filter: 2375220 reads failed due to low quality: 500 reads failed due to too many N: 682 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 83.2847% JSON report: SekiuWA_38.json HTML report: SekiuWA_38.html fastp -i SekiuWA_38.F.fq.gz -o SekiuWA_38.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_38.json -h SekiuWA_38.html fastp v0.20.0, time used: 32 seconds