WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 2508343
total bases: 361201392
Q20 bases: 351600649(97.342%)
Q30 bases: 332870190(92.1564%)

Read1 after filtering:
total reads: 2507425
total bases: 360670613
Q20 bases: 351434645(97.4392%)
Q30 bases: 332795977(92.2714%)

Filtering result:
reads passed filter: 2507425
reads failed due to low quality: 389
reads failed due to too many N: 529
reads failed due to too short: 0
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 91.5868%

JSON report: MontereyBayCA_442.json
HTML report: MontereyBayCA_442.html

fastp -i MontereyBayCA_442.F.fq.gz -o MontereyBayCA_442.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j MontereyBayCA_442.json -h MontereyBayCA_442.html 
fastp v0.20.0, time used: 31 seconds