WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 1322033
total bases: 190372752
Q20 bases: 185135850(97.2491%)
Q30 bases: 175056916(91.9548%)

Read1 after filtering:
total reads: 1321491
total bases: 190164944
Q20 bases: 185058978(97.315%)
Q30 bases: 175013223(92.0323%)

Filtering result:
reads passed filter: 1321491
reads failed due to low quality: 250
reads failed due to too many N: 292
reads failed due to too short: 0
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 88.3497%

JSON report: MontereyBayCA_432.json
HTML report: MontereyBayCA_432.html

fastp -i MontereyBayCA_432.F.fq.gz -o MontereyBayCA_432.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j MontereyBayCA_432.json -h MontereyBayCA_432.html 
fastp v0.20.0, time used: 21 seconds