WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 2511210
total bases: 361614240
Q20 bases: 352221018(97.4024%)
Q30 bases: 333909114(92.3385%)

Read1 after filtering:
total reads: 2510334
total bases: 361248564
Q20 bases: 352086426(97.4638%)
Q30 bases: 333833110(92.4109%)

Filtering result:
reads passed filter: 2510334
reads failed due to low quality: 313
reads failed due to too many N: 563
reads failed due to too short: 0
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 92.8006%

JSON report: MontereyBayCA_411.json
HTML report: MontereyBayCA_411.html

fastp -i MontereyBayCA_411.F.fq.gz -o MontereyBayCA_411.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j MontereyBayCA_411.json -h MontereyBayCA_411.html 
fastp v0.20.0, time used: 32 seconds