WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 1324899 total bases: 190785456 Q20 bases: 180434069(94.5743%) Q30 bases: 165114831(86.5448%) Read1 after filtering: total reads: 1324341 total bases: 190323366 Q20 bases: 180321855(94.745%) Q30 bases: 165086981(86.7403%) Filtering result: reads passed filter: 1324341 reads failed due to low quality: 405 reads failed due to too many N: 153 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 68.8898% JSON report: DabobBayWA_Q358.json HTML report: DabobBayWA_Q358.html fastp -i DabobBayWA_Q358.F.fq.gz -o DabobBayWA_Q358.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_Q358.json -h DabobBayWA_Q358.html fastp v0.20.0, time used: 23 seconds