WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 1939544 total bases: 279294336 Q20 bases: 263813075(94.457%) Q30 bases: 240957049(86.2735%) Read1 after filtering: total reads: 1938783 total bases: 278611298 Q20 bases: 263649902(94.63%) Q30 bases: 240919234(86.4715%) Filtering result: reads passed filter: 1938783 reads failed due to low quality: 536 reads failed due to too many N: 225 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 60.7726% JSON report: DabobBayWA_Q244.json HTML report: DabobBayWA_Q244.html fastp -i DabobBayWA_Q244.F.fq.gz -o DabobBayWA_Q244.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_Q244.json -h DabobBayWA_Q244.html fastp v0.20.0, time used: 29 seconds