WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 2793822
total bases: 402310368
Q20 bases: 381344858(94.7887%)
Q30 bases: 349504277(86.8743%)

Read1 after filtering:
total reads: 2792712
total bases: 401535204
Q20 bases: 381143311(94.9215%)
Q30 bases: 349445293(87.0273%)

Filtering result:
reads passed filter: 2792712
reads failed due to low quality: 732
reads failed due to too many N: 378
reads failed due to too short: 0
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 59.4018%

JSON report: DabobBayWA_Q239.json
HTML report: DabobBayWA_Q239.html

fastp -i DabobBayWA_Q239.F.fq.gz -o DabobBayWA_Q239.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_Q239.json -h DabobBayWA_Q239.html 
fastp v0.20.0, time used: 35 seconds