WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 2006203 total bases: 288893232 Q20 bases: 272730046(94.4051%) Q30 bases: 248970525(86.1808%) Read1 after filtering: total reads: 2005312 total bases: 288204355 Q20 bases: 272559667(94.5717%) Q30 bases: 248927267(86.3718%) Filtering result: reads passed filter: 2005312 reads failed due to low quality: 646 reads failed due to too many N: 245 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 59.6261% JSON report: DabobBayWA_Q236.json HTML report: DabobBayWA_Q236.html fastp -i DabobBayWA_Q236.F.fq.gz -o DabobBayWA_Q236.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_Q236.json -h DabobBayWA_Q236.html fastp v0.20.0, time used: 30 seconds