WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 2911711 total bases: 419286384 Q20 bases: 397216976(94.7364%) Q30 bases: 363783165(86.7625%) Read1 after filtering: total reads: 2910605 total bases: 418251894 Q20 bases: 396964774(94.9105%) Q30 bases: 363723196(86.9627%) Filtering result: reads passed filter: 2910605 reads failed due to low quality: 717 reads failed due to too many N: 389 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 59.7507% JSON report: DabobBayWA_Q234.json HTML report: DabobBayWA_Q234.html fastp -i DabobBayWA_Q234.F.fq.gz -o DabobBayWA_Q234.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_Q234.json -h DabobBayWA_Q234.html fastp v0.20.0, time used: 37 seconds