WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 2379044 total bases: 342582336 Q20 bases: 324169905(94.6254%) Q30 bases: 296343546(86.5029%) Read1 after filtering: total reads: 2378026 total bases: 341914005 Q20 bases: 323995650(94.7594%) Q30 bases: 296293100(86.6572%) Filtering result: reads passed filter: 2378026 reads failed due to low quality: 732 reads failed due to too many N: 286 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 57.659% JSON report: DabobBayWA_Q233.json HTML report: DabobBayWA_Q233.html fastp -i DabobBayWA_Q233.F.fq.gz -o DabobBayWA_Q233.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_Q233.json -h DabobBayWA_Q233.html fastp v0.20.0, time used: 32 seconds