WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 3221078 total bases: 463835232 Q20 bases: 438457239(94.5287%) Q30 bases: 400661851(86.3802%) Read1 after filtering: total reads: 3219778 total bases: 462027869 Q20 bases: 438050471(94.8104%) Q30 bases: 400597367(86.7042%) Filtering result: reads passed filter: 3219778 reads failed due to low quality: 912 reads failed due to too many N: 388 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 58.2497% JSON report: DabobBayWA_Q231.json HTML report: DabobBayWA_Q231.html fastp -i DabobBayWA_Q231.F.fq.gz -o DabobBayWA_Q231.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_Q231.json -h DabobBayWA_Q231.html fastp v0.20.0, time used: 40 seconds