WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 2037837 total bases: 293448528 Q20 bases: 278081633(94.7633%) Q30 bases: 254864701(86.8516%) Read1 after filtering: total reads: 2037059 total bases: 292837191 Q20 bases: 277929875(94.9094%) Q30 bases: 254824998(87.0193%) Filtering result: reads passed filter: 2037059 reads failed due to low quality: 542 reads failed due to too many N: 236 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 64.4193% JSON report: DabobBayWA_FG249.json HTML report: DabobBayWA_FG249.html fastp -i DabobBayWA_FG249.F.fq.gz -o DabobBayWA_FG249.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_FG249.json -h DabobBayWA_FG249.html fastp v0.20.0, time used: 29 seconds