WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 2483629 total bases: 357642576 Q20 bases: 346639537(96.9235%) Q30 bases: 326188401(91.2051%) Read1 after filtering: total reads: 2482520 total bases: 357244429 Q20 bases: 346488419(96.9892%) Q30 bases: 326104454(91.2833%) Filtering result: reads passed filter: 2482520 reads failed due to low quality: 534 reads failed due to too many N: 575 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 86.0138% JSON report: DabobBayWA_FG221.json HTML report: DabobBayWA_FG221.html fastp -i DabobBayWA_FG221.F.fq.gz -o DabobBayWA_FG221.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_FG221.json -h DabobBayWA_FG221.html fastp v0.20.0, time used: 31 seconds