WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 2268884 total bases: 326719296 Q20 bases: 317033097(97.0353%) Q30 bases: 298181862(91.2655%) Read1 after filtering: total reads: 2267737 total bases: 326401332 Q20 bases: 316890427(97.0861%) Q30 bases: 298089683(91.3261%) Filtering result: reads passed filter: 2267737 reads failed due to low quality: 493 reads failed due to too many N: 654 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 85.3373% JSON report: DabobBayWA_FG220.json HTML report: DabobBayWA_FG220.html fastp -i DabobBayWA_FG220.F.fq.gz -o DabobBayWA_FG220.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_FG220.json -h DabobBayWA_FG220.html fastp v0.20.0, time used: 29 seconds