WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 2592853 total bases: 373370832 Q20 bases: 363412473(97.3329%) Q30 bases: 344172500(92.1798%) Read1 after filtering: total reads: 2591891 total bases: 372838031 Q20 bases: 363240051(97.4257%) Q30 bases: 344089884(92.2894%) Filtering result: reads passed filter: 2591891 reads failed due to low quality: 357 reads failed due to too many N: 605 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 91.2494% JSON report: DabobBayWA_FG214.json HTML report: DabobBayWA_FG214.html fastp -i DabobBayWA_FG214.F.fq.gz -o DabobBayWA_FG214.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_FG214.json -h DabobBayWA_FG214.html fastp v0.20.0, time used: 31 seconds