WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 3158370 total bases: 454805280 Q20 bases: 446226831(98.1138%) Q30 bases: 432691786(95.1378%) Read1 after filtering: total reads: 3155241 total bases: 454352642 Q20 bases: 445900647(98.1398%) Q30 bases: 432414011(95.1715%) Filtering result: reads passed filter: 3155241 reads failed due to low quality: 614 reads failed due to too many N: 2515 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 87.9041% JSON report: DabobBayWA_FG207.json HTML report: DabobBayWA_FG207.html fastp -i DabobBayWA_FG207.F.fq.gz -o DabobBayWA_FG207.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_FG207.json -h DabobBayWA_FG207.html fastp v0.20.0, time used: 35 seconds