WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 4112473 total bases: 592196112 Q20 bases: 580847678(98.0837%) Q30 bases: 562982852(95.067%) Read1 after filtering: total reads: 4108531 total bases: 591625714 Q20 bases: 580437639(98.1089%) Q30 bases: 562634236(95.0997%) Filtering result: reads passed filter: 4108531 reads failed due to low quality: 795 reads failed due to too many N: 3146 reads failed due to too short: 1 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 85.1342% JSON report: DabobBayWA_FG201.json HTML report: DabobBayWA_FG201.html fastp -i DabobBayWA_FG201.F.fq.gz -o DabobBayWA_FG201.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_FG201.json -h DabobBayWA_FG201.html fastp v0.20.0, time used: 42 seconds