WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 2310635
total bases: 332731440
Q20 bases: 313641360(94.2626%)
Q30 bases: 285711025(85.8684%)

Read1 after filtering:
total reads: 2309437
total bases: 332005287
Q20 bases: 313449602(94.411%)
Q30 bases: 285656239(86.0397%)

Filtering result:
reads passed filter: 2309437
reads failed due to low quality: 916
reads failed due to too many N: 282
reads failed due to too short: 0
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 57.7866%

JSON report: CypressIslandWA_FG137.json
HTML report: CypressIslandWA_FG137.html

fastp -i CypressIslandWA_FG137.F.fq.gz -o CypressIslandWA_FG137.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j CypressIslandWA_FG137.json -h CypressIslandWA_FG137.html 
fastp v0.20.0, time used: 33 seconds