WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 3027797
total bases: 436002768
Q20 bases: 413633024(94.8694%)
Q30 bases: 379270821(86.9882%)

Read1 after filtering:
total reads: 3026624
total bases: 435028224
Q20 bases: 413390521(95.0261%)
Q30 bases: 379209531(87.1689%)

Filtering result:
reads passed filter: 3026624
reads failed due to low quality: 793
reads failed due to too many N: 380
reads failed due to too short: 0
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 57.9614%

JSON report: CypressIslandWA_FG125.json
HTML report: CypressIslandWA_FG125.html

fastp -i CypressIslandWA_FG125.F.fq.gz -o CypressIslandWA_FG125.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j CypressIslandWA_FG125.json -h CypressIslandWA_FG125.html 
fastp v0.20.0, time used: 38 seconds