WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 3273700
total bases: 471412800
Q20 bases: 462487049(98.1066%)
Q30 bases: 448365983(95.1111%)

Read1 after filtering:
total reads: 3270433
total bases: 470940107
Q20 bases: 462148338(98.1331%)
Q30 bases: 448078256(95.1455%)

Filtering result:
reads passed filter: 3270433
reads failed due to low quality: 628
reads failed due to too many N: 2639
reads failed due to too short: 0
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 86.7284%

JSON report: CatalinaCA_Q354.json
HTML report: CatalinaCA_Q354.html

fastp -i CatalinaCA_Q354.F.fq.gz -o CatalinaCA_Q354.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j CatalinaCA_Q354.json -h CatalinaCA_Q354.html 
fastp v0.20.0, time used: 35 seconds