WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 1354637
total bases: 195067728
Q20 bases: 191440897(98.1407%)
Q30 bases: 185524599(95.1078%)

Read1 after filtering:
total reads: 1353357
total bases: 194882514
Q20 bases: 191306711(98.1651%)
Q30 bases: 185410285(95.1395%)

Filtering result:
reads passed filter: 1353357
reads failed due to low quality: 223
reads failed due to too many N: 1057
reads failed due to too short: 0
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 84.6168%

JSON report: CatalinaCA_Q353.json
HTML report: CatalinaCA_Q353.html

fastp -i CatalinaCA_Q353.F.fq.gz -o CatalinaCA_Q353.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j CatalinaCA_Q353.json -h CatalinaCA_Q353.html 
fastp v0.20.0, time used: 21 seconds