WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 6260859
total bases: 901563696
Q20 bases: 884386748(98.0948%)
Q30 bases: 857264614(95.0864%)

Read1 after filtering:
total reads: 6254651
total bases: 900665958
Q20 bases: 883742266(98.121%)
Q30 bases: 856717742(95.1205%)

Filtering result:
reads passed filter: 6254651
reads failed due to low quality: 1210
reads failed due to too many N: 4998
reads failed due to too short: 0
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 77.7312%

JSON report: CatalinaCA_Q352.json
HTML report: CatalinaCA_Q352.html

fastp -i CatalinaCA_Q352.F.fq.gz -o CatalinaCA_Q352.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j CatalinaCA_Q352.json -h CatalinaCA_Q352.html 
fastp v0.20.0, time used: 58 seconds