WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 3688935
total bases: 531206640
Q20 bases: 520802149(98.0413%)
Q30 bases: 504415404(94.9565%)

Read1 after filtering:
total reads: 3685276
total bases: 530676859
Q20 bases: 520417646(98.0668%)
Q30 bases: 504087036(94.9895%)

Filtering result:
reads passed filter: 3685276
reads failed due to low quality: 615
reads failed due to too many N: 3044
reads failed due to too short: 0
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 84.3528%

JSON report: CatalinaCA_Q330.json
HTML report: CatalinaCA_Q330.html

fastp -i CatalinaCA_Q330.F.fq.gz -o CatalinaCA_Q330.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j CatalinaCA_Q330.json -h CatalinaCA_Q330.html 
fastp v0.20.0, time used: 38 seconds