WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 1506964 total bases: 217002816 Q20 bases: 210963255(97.2168%) Q30 bases: 199692632(92.0231%) Read1 after filtering: total reads: 1506442 total bases: 216614526 Q20 bases: 210851132(97.3393%) Q30 bases: 199648162(92.1675%) Filtering result: reads passed filter: 1506442 reads failed due to low quality: 199 reads failed due to too many N: 323 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 92.301% JSON report: CatalinaCA_385.json HTML report: CatalinaCA_385.html fastp -i CatalinaCA_385.F.fq.gz -o CatalinaCA_385.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j CatalinaCA_385.json -h CatalinaCA_385.html fastp v0.20.0, time used: 22 seconds