WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 2311332 total bases: 332831808 Q20 bases: 323742127(97.269%) Q30 bases: 306485349(92.0842%) Read1 after filtering: total reads: 2310477 total bases: 332410591 Q20 bases: 323603165(97.3504%) Q30 bases: 306416512(92.1801%) Filtering result: reads passed filter: 2310477 reads failed due to low quality: 368 reads failed due to too many N: 487 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 90.7371% JSON report: CatalinaCA_383.json HTML report: CatalinaCA_383.html fastp -i CatalinaCA_383.F.fq.gz -o CatalinaCA_383.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j CatalinaCA_383.json -h CatalinaCA_383.html fastp v0.20.0, time used: 29 seconds