WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 1474951
total bases: 212392944
Q20 bases: 206514297(97.2322%)
Q30 bases: 195171364(91.8916%)

Read1 after filtering:
total reads: 1474440
total bases: 212145551
Q20 bases: 206430130(97.3059%)
Q30 bases: 195127804(91.9783%)

Filtering result:
reads passed filter: 1474440
reads failed due to low quality: 189
reads failed due to too many N: 322
reads failed due to too short: 0
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 90.2785%

JSON report: CatalinaCA_378.json
HTML report: CatalinaCA_378.html

fastp -i CatalinaCA_378.F.fq.gz -o CatalinaCA_378.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j CatalinaCA_378.json -h CatalinaCA_378.html 
fastp v0.20.0, time used: 23 seconds