WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 2198953 total bases: 316649232 Q20 bases: 307137693(96.9962%) Q30 bases: 288643296(91.1555%) Read1 after filtering: total reads: 2197431 total bases: 316344000 Q20 bases: 306985047(97.0415%) Q30 bases: 288541491(91.2113%) Filtering result: reads passed filter: 2197431 reads failed due to low quality: 866 reads failed due to too many N: 656 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 47.0346% JSON report: SekiuWA_FG020.json HTML report: SekiuWA_FG020.html fastp -i SekiuWA_FG020.F.fq.gz -o SekiuWA_FG020.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_FG020.json -h SekiuWA_FG020.html fastp v0.20.0, time used: 31 seconds