WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 1985823 total bases: 285958512 Q20 bases: 276614663(96.7324%) Q30 bases: 259802850(90.8533%) Read1 after filtering: total reads: 1978615 total bases: 284905066 Q20 bases: 276004628(96.876%) Q30 bases: 259368257(91.0367%) Filtering result: reads passed filter: 1978615 reads failed due to low quality: 4452 reads failed due to too many N: 2756 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 62.7182% JSON report: SekiuWA_63.json HTML report: SekiuWA_63.html fastp -i SekiuWA_63.F.fq.gz -o SekiuWA_63.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_63.json -h SekiuWA_63.html fastp v0.20.0, time used: 28 seconds