WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 4095097 total bases: 589693968 Q20 bases: 572128422(97.0212%) Q30 bases: 538658016(91.3453%) Read1 after filtering: total reads: 4080364 total bases: 587543653 Q20 bases: 570867597(97.1617%) Q30 bases: 537751029(91.5253%) Filtering result: reads passed filter: 4080364 reads failed due to low quality: 8797 reads failed due to too many N: 5936 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 58.9695% JSON report: SekiuWA_59.json HTML report: SekiuWA_59.html fastp -i SekiuWA_59.F.fq.gz -o SekiuWA_59.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_59.json -h SekiuWA_59.html fastp v0.20.0, time used: 46 seconds