WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 3536497 total bases: 509255568 Q20 bases: 494130711(97.03%) Q30 bases: 465666820(91.4407%) Read1 after filtering: total reads: 3525184 total bases: 507569642 Q20 bases: 493123273(97.1538%) Q30 bases: 464924498(91.5982%) Filtering result: reads passed filter: 3525184 reads failed due to low quality: 6216 reads failed due to too many N: 5097 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 53.2557% JSON report: SekiuWA_55.json HTML report: SekiuWA_55.html fastp -i SekiuWA_55.F.fq.gz -o SekiuWA_55.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_55.json -h SekiuWA_55.html fastp v0.20.0, time used: 43 seconds