WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 2699099 total bases: 388670256 Q20 bases: 377244545(97.0603%) Q30 bases: 356032182(91.6026%) Read1 after filtering: total reads: 2690635 total bases: 387410431 Q20 bases: 376495517(97.1826%) Q30 bases: 355483304(91.7588%) Filtering result: reads passed filter: 2690635 reads failed due to low quality: 4708 reads failed due to too many N: 3756 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 56.5438% JSON report: SekiuWA_52.json HTML report: SekiuWA_52.html fastp -i SekiuWA_52.F.fq.gz -o SekiuWA_52.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_52.json -h SekiuWA_52.html fastp v0.20.0, time used: 35 seconds