WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 5419460 total bases: 780402240 Q20 bases: 756205683(96.8995%) Q30 bases: 710820362(91.0838%) Read1 after filtering: total reads: 5401499 total bases: 777779050 Q20 bases: 754649893(97.0263%) Q30 bases: 709689062(91.2456%) Filtering result: reads passed filter: 5401499 reads failed due to low quality: 10309 reads failed due to too many N: 7652 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 56.4433% JSON report: SekiuWA_38.json HTML report: SekiuWA_38.html fastp -i SekiuWA_38.F.fq.gz -o SekiuWA_38.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_38.json -h SekiuWA_38.html fastp v0.20.0, time used: 61 seconds