WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
No adapter detected for read1

Read1 before filtering:
total reads: 1460334
total bases: 210288096
Q20 bases: 203382843(96.7163%)
Q30 bases: 191050425(90.8518%)

Read1 after filtering:
total reads: 1455587
total bases: 209584601
Q20 bases: 202963277(96.8407%)
Q30 bases: 190743587(91.0103%)

Filtering result:
reads passed filter: 1455587
reads failed due to low quality: 2635
reads failed due to too many N: 2112
reads failed due to too short: 0
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate (may be overestimated since this is SE data): 60.5737%

JSON report: MontereyBayCA_445.json
HTML report: MontereyBayCA_445.html

fastp -i MontereyBayCA_445.F.fq.gz -o MontereyBayCA_445.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j MontereyBayCA_445.json -h MontereyBayCA_445.html 
fastp v0.20.0, time used: 23 seconds