WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 4019160 total bases: 578759040 Q20 bases: 562437223(97.1799%) Q30 bases: 540102985(93.3209%) Read1 after filtering: total reads: 4009882 total bases: 577421006 Q20 bases: 561708934(97.2789%) Q30 bases: 539600031(93.45%) Filtering result: reads passed filter: 4009882 reads failed due to low quality: 6977 reads failed due to too many N: 2301 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 74.9328% JSON report: DabobBayWA_Q364.json HTML report: DabobBayWA_Q364.html fastp -i DabobBayWA_Q364.F.fq.gz -o DabobBayWA_Q364.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_Q364.json -h DabobBayWA_Q364.html fastp v0.20.0, time used: 45 seconds