WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
CGGCAGCAAGAACCATACGACCAATATCACGAAAATAGTCACGCAAAGCATTGGGATTAT

Read1 before filtering:
total reads: 2821259
total bases: 406261296
Q20 bases: 394854261(97.1922%)
Q30 bases: 378950828(93.2776%)

Read1 after filtering:
total reads: 2794923
total bases: 402416823
Q20 bases: 391471274(97.28%)
Q30 bases: 375822218(93.3913%)

Filtering result:
reads passed filter: 2794923
reads failed due to low quality: 4563
reads failed due to too many N: 1610
reads failed due to too short: 20163
reads with adapter trimmed: 26717
bases trimmed due to adapters: 2953866

Duplication rate (may be overestimated since this is SE data): 73.1317%

JSON report: DabobBayWA_Q361.json
HTML report: DabobBayWA_Q361.html

fastp -i DabobBayWA_Q361.F.fq.gz -o DabobBayWA_Q361.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_Q361.json -h DabobBayWA_Q361.html 
fastp v0.20.0, time used: 29 seconds