WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
GCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGGCGCTGAA

Read1 before filtering:
total reads: 3377323
total bases: 486334512
Q20 bases: 473083123(97.2753%)
Q30 bases: 454366798(93.4268%)

Read1 after filtering:
total reads: 3347323
total bases: 481928515
Q20 bases: 469214442(97.3618%)
Q30 bases: 450808259(93.5426%)

Filtering result:
reads passed filter: 3347323
reads failed due to low quality: 5023
reads failed due to too many N: 1972
reads failed due to too short: 23005
reads with adapter trimmed: 38507
bases trimmed due to adapters: 3396781

Duplication rate (may be overestimated since this is SE data): 70.2866%

JSON report: DabobBayWA_Q360.json
HTML report: DabobBayWA_Q360.html

fastp -i DabobBayWA_Q360.F.fq.gz -o DabobBayWA_Q360.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_Q360.json -h DabobBayWA_Q360.html 
fastp v0.20.0, time used: 31 seconds