WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
CTTAAACTTCTTAGACGAATCACCAGAACGGAAAACATCCTTCATAGAAATTTCACGCGG

Read1 before filtering:
total reads: 3016067
total bases: 434313648
Q20 bases: 422565930(97.2951%)
Q30 bases: 405846154(93.4454%)

Read1 after filtering:
total reads: 2992471
total bases: 429989168
Q20 bases: 418730478(97.3816%)
Q30 bases: 402298828(93.5602%)

Filtering result:
reads passed filter: 2992471
reads failed due to low quality: 4543
reads failed due to too many N: 1742
reads failed due to too short: 17311
reads with adapter trimmed: 34108
bases trimmed due to adapters: 3417183

Duplication rate (may be overestimated since this is SE data): 72.5902%

JSON report: DabobBayWA_Q244.json
HTML report: DabobBayWA_Q244.html

fastp -i DabobBayWA_Q244.F.fq.gz -o DabobBayWA_Q244.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_Q244.json -h DabobBayWA_Q244.html 
fastp v0.20.0, time used: 29 seconds