WARNING: cut_by_quality5 is deprecated, please use cut_front instead.
Detecting adapter sequence for read1...
TTCAGCAGCCAGCTTGCGGCAAAACTGCGTAACCGTCTTCTCGTTCTCTAAAAACCATTT

Read1 before filtering:
total reads: 1858968
total bases: 267691392
Q20 bases: 259770820(97.0412%)
Q30 bases: 249480167(93.1969%)

Read1 after filtering:
total reads: 1845336
total bases: 265698388
Q20 bases: 258088341(97.1358%)
Q30 bases: 247957806(93.323%)

Filtering result:
reads passed filter: 1845336
reads failed due to low quality: 3103
reads failed due to too many N: 1060
reads failed due to too short: 9469
reads with adapter trimmed: 14245
bases trimmed due to adapters: 1392273

Duplication rate (may be overestimated since this is SE data): 75.6264%

JSON report: DabobBayWA_Q240.json
HTML report: DabobBayWA_Q240.html

fastp -i DabobBayWA_Q240.F.fq.gz -o DabobBayWA_Q240.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j DabobBayWA_Q240.json -h DabobBayWA_Q240.html 
fastp v0.20.0, time used: 19 seconds